Welcome to the Waldron lab for public health data science at the CUNY School of Public Health in New York City. I, Levi Waldron, teach biostatistics, have an active research program in cancer genomics and in metagenomic profiling of the human microbiome, develop methods within the intersection of statistical analysis and computation, and work to develop an inclusive community of researchers and students around open-source bioinformatics software and methods. My lab aims to generate new insights into human health, disease, and treatment through improved tools and novel analysis of publicly available data. I welcome anyone to get involved and join active communities working on BugSigDB: A Comprehensive Database of Microbial Signatures and the Microbiome Virtual International Forum.
Waldron Lab at the CUNY SPH
Software and educational materials from the Waldron lab for computational biostatistics at the CUNY SPH in New York City
- 108 followers
- New York, NY, USA
- https://waldronlab.io/
- @LeviWaldron1
- Levi.Waldron@sph.cuny.edu
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Repositories
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- ai-agent-skills Public
A collection of AI agent skills relevant to our work, including analysis and development of R/Bioconductor packages + statistical and bioinformatic analysis.
waldronlab/ai-agent-skills’s past year of commit activity - curatedOvarianData Public
The curatedOvarianData package provides data for gene expression analysis in patients with ovarian cancer
waldronlab/curatedOvarianData’s past year of commit activity - curatedCRCData Public
The curatedCRCData package provides ExpressionSet data with curated metadata and microarray gene expression data from colorectal cancer tumors.
waldronlab/curatedCRCData’s past year of commit activity - bioanalyzer-backend Public
Streamline BugSigDB curation with AI-powered scientific paper analysis. Automatically extracts essential microbiome study metadata from research papers, reducing manual curation time and improving data quality for the BugSigDB database.
waldronlab/bioanalyzer-backend’s past year of commit activity
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