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Add CLAUDE.md with codebase guidance for Claude Code#16

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rcannood merged 3 commits into
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add-claude
May 18, 2026
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Add CLAUDE.md with codebase guidance for Claude Code#16
rcannood merged 3 commits into
mainfrom
add-claude

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@dariarom94
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@dariarom94 dariarom94 commented May 14, 2026

Describe your changes

This is a test attempt to add the md file with information about the project (in theory should be readable by any LLM)

Checklist before requesting a review

  • I have performed a self-review of my code

  • Check the correct box. Does this PR contain:

    • Breaking changes
    • New functionality
    • Major changes
    • Minor changes
    • Bug fixes
  • Proposed changes are described in the CHANGELOG.md

  • CI Tests succeed and look good!

dariarom94 and others added 2 commits May 14, 2026 13:33
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
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@VladimirShitov VladimirShitov left a comment

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Looks good to me! When I worked in Cursor, it often got confused with Nextflow files because they are not complete to be run in Nextflow and are further processed by Viash. If this is a problem for Claude as well, worth adding a note in here. Or maybe just in general something like "Always use viash to run commands, never execute python or nextflow without viash"

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@heylf heylf left a comment

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LG

@rcannood rcannood merged commit 0e3d3e8 into main May 18, 2026
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@rcannood rcannood deleted the add-claude branch May 18, 2026 06:36
rcannood added a commit that referenced this pull request May 18, 2026
* Add CLAUDE.md with codebase guidance for Claude Code

* add instructions on summary

* add test instructions

Signed-off-by: Robrecht Cannoodt <rcannood@gmail.com>
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4 participants