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@genome

The McDonnell Genome Institute

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  1. gms gms Public archive

    The Genome Modeling System installer

    Perl 78 23

  2. bam-readcount bam-readcount Public

    Count bases in BAM/CRAM files

    CMake 323 99

  3. sciclone sciclone Public

    An R package for inferring the subclonal architecture of tumors

    R 122 56

  4. analysis-workflows analysis-workflows Public

    Open workflow definitions for genomic analysis from MGI at WUSM.

    Common Workflow Language 104 56

  5. genome genome Public

    Core modules used by the GMS

    Perl 69 57

  6. bfx-workshop bfx-workshop Public

    A course on genomics and bioinformatics from WashU

    HTML 79 25

Repositories

Showing 10 of 172 repositories
  • bfx-workshop Public

    A course on genomics and bioinformatics from WashU

    genome/bfx-workshop’s past year of commit activity
    HTML 79 25 0 0 Updated Mar 17, 2026
  • bmm Public

    R package that uses a variational Bayesian approach to fitting a mixture of Beta distributions

    genome/bmm’s past year of commit activity
    R 4 9 2 0 Updated Mar 15, 2026
  • sciclone Public

    An R package for inferring the subclonal architecture of tumors

    genome/sciclone’s past year of commit activity
    R 122 56 4 1 Updated Mar 15, 2026
  • analysis-workflows Public

    Open workflow definitions for genomic analysis from MGI at WUSM.

    genome/analysis-workflows’s past year of commit activity
    Common Workflow Language 104 MIT 56 74 15 Updated Jun 23, 2025
  • docker-bam_readcount_helper-cwl Public
    genome/docker-bam_readcount_helper-cwl’s past year of commit activity
    Python 3 9 2 1 Updated Mar 10, 2025
  • docker-bam-readcount-cwl Public
    genome/docker-bam-readcount-cwl’s past year of commit activity
    0 1 0 0 Updated Mar 10, 2025
  • docker-bam-readcount Public

    Docker containerization for "bam-readcount"

    genome/docker-bam-readcount’s past year of commit activity
    Dockerfile 0 5 0 1 Updated Mar 9, 2025
  • docker-vep_helper-cwl Public
    genome/docker-vep_helper-cwl’s past year of commit activity
    Perl 0 3 1 0 Updated Dec 19, 2024
  • qc-analysis-pipeline Public Forked from gatk-workflows/five-dollar-genome-analysis-pipeline

    Workflow used for WGS/WES data QC

    genome/qc-analysis-pipeline’s past year of commit activity
    WDL 8 BSD-3-Clause 43 9 0 Updated Oct 16, 2024
  • UR Public

    Rich Transactional Objects for Perl

    genome/UR’s past year of commit activity
    Perl 3 12 8 4 Updated Jun 15, 2024
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