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Currently, brainweb notebook uses `zoom_image` and `sed`. This causes problems across OS's and if STIR executables haven't been compiled. This can simply be solved by supplying the _small images.
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So we expose stir.zoom-image already? If not, I think that'd be useful. We could then replace sed with some python code. I'd prefer that over adding more binary data
Kris
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From: Richard Brown <notifications@github.com>
Sent: Friday, November 8, 2019 5:18:58 PM
To: CCPPETMR/SIRF_data <SIRF_data@noreply.github.com>
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Subject: [CCPPETMR/SIRF_data] Include _small files (#3)
Currently, the BrainWeb.ipynb<https://github.com/CCPPETMR/SIRF-Exercises/blob/master/notebooks/Synergistic/BrainWeb.ipynb> notebook uses zoom_image and sed. This causes problems across different OS's and if STIR executables haven't been compiled.
This can simply be solved by supplying the _small images.
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You can view, comment on, or merge this pull request online at:
#3
Commit Summary
* Include _small files
File Changes
* A examples/Synergistic/brainweb/Amyloid_small.hv<https://github.com/CCPPETMR/SIRF_data/pull/3/files#diff-0> (26)
* A examples/Synergistic/brainweb/Amyloid_small.v<https://github.com/CCPPETMR/SIRF_data/pull/3/files#diff-1> (0)
* A examples/Synergistic/brainweb/FDG_small.hv<https://github.com/CCPPETMR/SIRF_data/pull/3/files#diff-2> (26)
* A examples/Synergistic/brainweb/FDG_small.v<https://github.com/CCPPETMR/SIRF_data/pull/3/files#diff-3> (0)
* A examples/Synergistic/brainweb/T1_small.hv<https://github.com/CCPPETMR/SIRF_data/pull/3/files#diff-4> (26)
* A examples/Synergistic/brainweb/T1_small.v<https://github.com/CCPPETMR/SIRF_data/pull/3/files#diff-5> (0)
* A examples/Synergistic/brainweb/T2_small.hv<https://github.com/CCPPETMR/SIRF_data/pull/3/files#diff-6> (26)
* A examples/Synergistic/brainweb/T2_small.v<https://github.com/CCPPETMR/SIRF_data/pull/3/files#diff-7> (0)
* A examples/Synergistic/brainweb/uMap_small.hv<https://github.com/CCPPETMR/SIRF_data/pull/3/files#diff-8> (26)
* A examples/Synergistic/brainweb/uMap_small.v<https://github.com/CCPPETMR/SIRF_data/pull/3/files#diff-9> (0)
Patch Links:
* https://github.com/CCPPETMR/SIRF_data/pull/3.patch
* https://github.com/CCPPETMR/SIRF_data/pull/3.diff
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We don't currently expose |
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Currently, the BrainWeb.ipynb notebook uses
zoom_imageandsed. This causes problems across different OS's and if STIR executables haven't been compiled.This can simply be solved by supplying the
_smallimages.