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Needleman Wunsch Algorithm Implementation in Python

CS599 graduate course Homework 3:

  • Implementation of the Needleman Wunsch algorithm in python.
  • Problem #1: Implement Needleman-Wunsch algorithm A. Implement a function python that would implement the Needleman-Wunsch alignment between two genomic sequences. a. The function must take a genomic similarity scoring matrix and gap penalty as an input. b. The function must return: i. score for best alignment ii. alignment in text format (struct if implemented in C, list of lists or other object if implemented in python). See below.

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CS599 Homework 3 implementation of the needleman wunsch algorithm in python

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